PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G47320.1   ribosomal protein S19

Lab Annot. RPS19 (40S ribosomal protein S19); RNA binding
Mapman: 29.2.1.2.1.19 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19
Curated Location cytosol

TAIR curated location: mitochondrial small ribosomal subunit8641279
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23830.1 11Arabidopsis thaliana5E-4312061757 (1)M
AT3G23830.2 11Arabidopsis thaliana5E-4312061757 (1)M
AT4G13850.3 11Arabidopsis thaliana1E-421186176126 (97)M
Osm1g00450.1 7Oryza sativa9E-318167813 (3)M
Os01g68790.2 7Oryza sativa1E-2590547521 (21)C
Os01g68790.3 7Oryza sativa1E-2590547510 (10)C
Zm00001eb219510_P003 agpv5Zea mays4E-317969820 (0)M
Zm00001eb219510_P002 agpv5Zea mays4E-317969820 (0)M
Zm00001eb219510_P004 agpv5Zea mays4E-317969820 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DnaI_N(1) Ribosomal_S19(1) RRM_1(1) RRM_7(1)
TargetP: Mitochondria (Class 4 C0.072; M0.613; S0.023; _0.261)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 212 aa (-cTP 122)
Molecular Weight 23.64 kDA(-cTP )
PI 9.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help