PPDB

 The Plant Proteome Database

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AT5G47240.1   nudix hydrolase homolog 8
Lab Annot. nudix hydrolase homolog 8
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47240.2 11Arabidopsis thaliana039892920 (0)_
AT5G47650.1 11Arabidopsis thaliana3E-90260517015 (5)_
AT5G47650.5 11Arabidopsis thaliana3E-9026051700 (0)_
Os04g46280.1 7Oryza sativa1E-13627866800 (0)C
Os06g42790.2 7Oryza sativa2E-8527248660 (0)C
Os06g42790.1 7Oryza sativa7E-8526948650 (0)C
v1_GRMZM2G175816_P03 4a53Zea mays2E-13027864790 (0)M
Zm00001eb074890_P003 agpv5Zea mays2E-13027864790 (0)M
GRMZM2G175816_P03 3.21Zea mays2E-13027864790 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NUDIX(1) Nudix_hydro(1)
TargetP: Cytoplasm (Class 3 C0.051; M0.162; S0.061; _0.755)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 369 aa (-cTP 283)
Molecular Weight 41.31 kDA(-cTP )
PI 6.37(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21533090(plasmodesmata-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help