PPDB

The Plant Proteome Database

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AT5G47180.1   Plant VAMP (vesicle-associated membrane protein) family protein

Lab Annot. Plant VAMP (vesicle-associated membrane protein) protein
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47180.2 11Arabidopsis thaliana3E-1642201001000 (0)_
AT2G45140.2 11Arabidopsis thaliana6E-5022143650 (0)_
AT3G60600.1 11Arabidopsis thaliana6E-50219405922 (22)_
Os10g40140.1 7Oryza sativa1E-8223053680 (0)_
Os02g43594.3 7Oryza sativa4E-6218855690 (0)_
Os02g43594.1 7Oryza sativa9E-6016954720 (0)_
Zm00001eb249150_P002 agpv5Zea mays4E-7822853670 (0)_
Zm00001eb249150_P003 agpv5Zea mays4E-7822853670 (0)_
v1_GRMZM2G171406_P06 4a53Zea mays4E-7822853671 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Herpes_UL6(1) Motile_Sperm(1)
TargetP: Cytoplasm (Class 2 C0.077; M0.074; S0.161; _0.891)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 220 aa (-cTP 149)
Molecular Weight 24.67 kDA(-cTP )
PI 8.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help