PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G47090.1   coiled-coil protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47090.2 11Arabidopsis thaliana03101001000 (0)_
Os06g04780.1 7Oryza sativa6E-9531850630 (0)_
Os10g03710.1 7Oryza sativa4E-207653690 (0)_
Zm00001eb377550_P001 agpv5Zea mays1E-9232348620 (0)_
v1_GRMZM2G105957_P01 4a53Zea mays1E-9232348620 (0)_
GRMZM2G545891_P01 3.21Zea mays1E-9232348620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CDC45(1) DUF2052(1) DUF3306(1) DUF4637(1) NOA36(1) RPN2_C(1) SDA1(1) Sporozoite_
TargetP: Cytoplasm (Class 2 C0.181; M0.087; S0.037; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 310 aa (-cTP 270)
Molecular Weight 36.40 kDA(-cTP )
PI 4.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help