PPDB

The Plant Proteome Database

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AT5G46900.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot.
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G46890.1 11Arabidopsis thaliana3E-7412795980 (0)S
AT4G12520.1 11Arabidopsis thaliana2E-3512755670 (0)S
AT4G12510.1 11Arabidopsis thaliana2E-3512755670 (0)S
Os04g46810.1 7Oryza sativa3E-3512653720 (0)S
Os04g46820.1 7Oryza sativa8E-3512654720 (0)S
Os02g44310.1 7Oryza sativa7E-328067850 (0)S
GRMZM2G391286_P01 3.21Zea mays3E-3412654690 (0)S
v1_GRMZM2G391286_P01 4a53Zea mays3E-3412654690 (0)S
Zm00001eb429540_P001 agpv5Zea mays3E-3412654690 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hydrophob_seed(1) LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 4 C0.235; M0.013; S0.554; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 127 aa (-cTP 71)
Molecular Weight 13.37 kDA(-cTP )
PI 9.35(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21325567(root-proteome (wt & det3))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help