PPDB

PPDB	The Plant Proteome Database

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AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G46870.2 11 Arabidopsis thaliana 0 295 100 100 0 (0) _
AT4G17720.1 11 Arabidopsis thaliana 9E-153 285 78 89 11 (9) _
AT5G16840.2 11 Arabidopsis thaliana 6E-91 237 59 76 48 (36) _
Os04g50790.1 7 Oryza sativa 2E-105 280 57 76 0 (0) _
Os04g50790.2 6 Oryza sativa 8E-104 280 57 76 0 (0) _
Os06g02240.1 7 Oryza sativa 2E-99 246 60 77 8 (8) _
Zm00001eb430040_P001 agpv5 Zea mays 3E-107 282 56 78 0 (0) _
GRMZM2G035719_P02 3.21 Zea mays 5E-107 282 58 76 0 (0) _
v1_GRMZM2G035719_P02 4a53 Zea mays 5E-107 282 58 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3069(2) RRM_1(1) RRM_3(3)
TargetP:	Cytoplasm (Class 3 C0.055; M0.075; S0.177; _0.753)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	295 aa (-cTP 288)
Molecular Weight	31.90 kDA(-cTP )
PI	5.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data