PPDB

PPDB	The Plant Proteome Database

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AT5G46790.1 PYR1-like 1

Lab Annot.

unknown protein cyclase/dehydrase domain
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G46790.2 11 Arabidopsis thaliana 2E-165 221 100 100 0 (0) C
AT4G17870.1 11 Arabidopsis thaliana 1E-109 193 76 87 28 (22) _
AT2G26040.1 11 Arabidopsis thaliana 2E-62 172 54 72 0 (0) _
Os10g42280.1 7 Oryza sativa 3E-76 182 62 77 50 (50) _
Os01g61210.1 7 Oryza sativa 9E-53 175 54 66 0 (0) _
Os02g13330.1 7 Oryza sativa 1E-52 192 50 66 0 (0) _
Zm00001eb024490_P001 agpv5 Zea mays 1E-77 177 66 77 0 (0) _
AC194914.3_FGP002 3.21 Zea mays 1E-77 177 66 77 12 (12) _
v1_AC194914.3_FGP002 4a53 Zea mays 1E-77 177 66 77 13 (13) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bet_v_1(1) Fer4_12(1) Polyketide_cyc(1) Polyketide_cyc2(1)
TargetP:	Chloroplast (Class 5 C0.692; M0.033; S0.066; _0.678)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	221 aa (-cTP 209)
Molecular Weight	25.36 kDA(-cTP 24.17)
PI	5.32(-cTP 5.42)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
19525416(leaf (wt and clpr4-1 mutant))
19874541(ABI1 interacting proteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data