PPDB

PPDB	The Plant Proteome Database

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AT5G46750.1 ARF-GAP domain 9

Lab Annot.

ADP-ribosylation factor domain protein
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17890.1 11 Arabidopsis thaliana 0 408 77 87 6 (4) _
AT4G17890.2 11 Arabidopsis thaliana 0 375 77 87 5 (3) _
AT2G35210.1 11 Arabidopsis thaliana 6E-162 406 63 77 0 (0) _
Os10g42420.1 7 Oryza sativa 4E-170 403 61 77 0 (0) _
Os03g63710.1 7 Oryza sativa 5E-167 419 59 76 22 (22) _
Os03g63710.2 7 Oryza sativa 7E-137 356 58 75 3 (3) _
Zm00001eb210570_P002 agpv5 Zea mays 1E-164 413 60 75 0 (0) _
Zm00001eb210570_P001 agpv5 Zea mays 1E-164 413 60 75 0 (0) _
v1_GRMZM2G083546_P01 4a53 Zea mays 1E-164 413 60 75 10 (10) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ArfGap(2) Rod-binding(2)
TargetP:	Cytoplasm (Class 2 C0.189; M0.038; S0.032; _0.919)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	402 aa (-cTP 326)
Molecular Weight	43.55 kDA(-cTP )
PI	8.47(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1356	Detail								leaf [A. thaliana]	total tissue - low mass region	wild-type
1357	Detail								leaf [A. thaliana]	total tissue - low mass region	clpt1xclpt2
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1427	Detail								[A. thaliana]	total leaf tissue 1.11	wild-type
1428	Detail								[A. thaliana]	total leaf tissue 1.11	Prep1_Prep2_t1_t2
1494	Detail								leaf [A. thaliana]
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2043	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2046	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2049	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2050	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2054	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2296	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
20733066(ABA effected phosphoproteome)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data