PPDB

PPDB	The Plant Proteome Database

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AT5G46650.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17920.1 11 Arabidopsis thaliana 4E-113 282 60 73 0 (0) _
AT2G35420.1 11 Arabidopsis thaliana 1E-39 264 35 49 0 (0) _
AT3G05200.1 11 Arabidopsis thaliana 6E-37 277 32 52 1 (1) S
Os02g52210.1 7 Oryza sativa 8E-31 304 29 43 0 (0) M
Os02g52210.2 7 Oryza sativa 8E-31 304 29 43 0 (0) M
Os09g29310.1 7 Oryza sativa 6E-29 311 27 42 0 (0) S
GRMZM2G082653_P01 3.21 Zea mays 9E-35 276 30 48 1 (1) _
Zm00001eb315600_P001 agpv5 Zea mays 9E-35 276 30 48 0 (0) _
v1_GRMZM2G082653_P01 4a53 Zea mays 9E-35 276 30 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CTU2(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) Rad50_zn_hook(1) RINGv(1) Shisa(2)
TargetP:	Cytoplasm (Class 2 C0.015; M0.320; S0.066; _0.939)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	289 aa (-cTP 281)
Molecular Weight	33.43 kDA(-cTP )
PI	5.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data