PPDB

The Plant Proteome Database

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AT5G46400.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G46400.3 11Arabidopsis thaliana08161001000 (0)_
AT5G46400.2 11Arabidopsis thaliana08161001000 (0)_
AT1G04080.4 11Arabidopsis thaliana8E-13055340580 (0)_
Os08g29124.1 7Oryza sativa5E-14257340580 (0)_
Os03g11200.1 7Oryza sativa5E-122525405928 (28)_
GRMZM2G008663_P01 3.21Zea mays2E-14451643620 (0)_
v1_GRMZM2G178294_P01 4a53Zea mays3E-12555040592 (2)_
GRMZM2G178294_P01 3.21Zea mays3E-125550405925 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1748(2) TPR_1(4) TPR_12(3) TPR_14(4) TPR_7(3) TPR_8(3)
TargetP: Cytoplasm (Class 2 C0.066; M0.145; S0.110; _0.917)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1036 aa (-cTP 1029)
Molecular Weight 118.66 kDA(-cTP )
PI 5.50(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help