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AT5G46390.1 Peptidase S41 family protein

Lab Annot.

CTPA-like1 (CTPAL1)
Mapman: 29.5.5.8.2* protein.degradation.serine protease.SK.S41

Curated Location

thylakoid-peripheral-lumenal-side (Pubmed: 23198870 18431481 )

TAIR curated location: thylakoid lumen (sensu Viridiplantae)11719511

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G46390.2 11 Arabidopsis thaliana 0 395 100 100 29 (12) C
AT3G57680.1 11 Arabidopsis thaliana 3E-28 293 27 52 0 (0) C
AT4G17740.2 11 Arabidopsis thaliana 3E-26 253 30 53 43 (36) C
Os01g47450.1 7 Oryza sativa 3E-133 317 60 77 0 (0) M
Os06g21380.1 7 Oryza sativa 1E-29 286 29 53 0 (0) C
Os02g57060.1 7 Oryza sativa 1E-09 115 33 55 8 (8) M
Zm00001eb359650_P003 agpv5 Zea mays 9E-133 287 63 81 0 (0) _
Zm00001eb359650_P001 agpv5 Zea mays 9E-133 287 63 81 0 (0) _
Zm00001eb359650_P002 agpv5 Zea mays 1E-95 215 61 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Di19_C(1) DUF3283(2) PDZ(1) PDZ_2(1) PDZ_6(1) Peptidase_S41(1) Tricorn_PDZ(1)
TargetP:	Chloroplast (Class 4 C0.550; M0.046; S0.034; _0.289)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	428 aa (-cTP 416) (-lTP 361)
Molecular Weight	46.48 kDA(-cTP 45.14)(-lTP 39.47)
PI	5.34(-cTP 5.26)(-lTP 5.172)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2308	Detail								leaf [A. thaliana]	PG plastoglobule
2310	Detail								leaf [A. thaliana]	PG plastoglobule
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2315	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2318	Detail								leaf [A. thaliana]	PG plastoglobule
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

11719511(Thylakoid lumen proteome)
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data