PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G46250.3   RNA-binding protein

Lab Annot. RNA-binding protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G46250.2 11Arabidopsis thaliana034099990 (0)_
AT5G46250.1 11Arabidopsis thaliana034098980 (0)_
AT2G43970.1 11Arabidopsis thaliana4E-40185406315 (9)C
Os01g55170.1 7Oryza sativa2E-4922846640 (0)_
Os12g12360.2 7Oryza sativa4E-4618743660 (0)C
Os12g12360.1 7Oryza sativa6E-4518743660 (0)C
Zm00001eb152790_P001 agpv5Zea mays2E-6224047670 (0)_
Zm00001eb152790_P002 agpv5Zea mays2E-6224047670 (0)_
GRMZM2G171518_P03 3.21Zea mays2E-4420843621 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: La(1) PHM7_cyt(2) RRM_1(1)
TargetP: Cytoplasm (Class 4 C0.383; M0.069; S0.122; _0.643)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 340 aa (-cTP 333)
Molecular Weight 38.26 kDA(-cTP )
PI 5.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help