PPDB

The Plant Proteome Database

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AT5G46230.1   hypothetical protein (Protein of unknown function%2C DUF538)

Lab Annot. unknown function, DUF538
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09310.1 11Arabidopsis thaliana3E-431294972248 (122)_
AT1G30020.1 11Arabidopsis thaliana5E-4011747760 (0)_
AT1G56580.1 11Arabidopsis thaliana5E-40132477138 (21)_
Os01g11240.1 7Oryza sativa3E-5114348755 (5)_
Os11g38210.1 7Oryza sativa2E-4113143700 (0)_
Os11g38220.1 7Oryza sativa4E-4014042690 (0)_
v1_GRMZM2G093405_P01 4a53Zea mays1E-5314249763 (3)_
v1_GRMZM2G093405_P02 4a53Zea mays1E-5314249763 (3)_
GRMZM2G093405_P06 3.21Zea mays1E-53142497616 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2341(2) DUF538(1) Phage_P2_GpU(1)
TargetP: Cytoplasm (Class 3 C0.302; M0.062; S0.079; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 143 aa (-cTP 64)
Molecular Weight 16.17 kDA(-cTP )
PI 6.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help