PPDB

PPDB	The Plant Proteome Database

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AT5G46180.1 ornithine-delta-aminotransferase

Lab Annot.

ornithine-delta-aminotransferase
Mapman: 13.2.2.3 amino acid metabolism.degradation.glutamate family.arginine

Curated Location

mitochondria (Pubmed: 18419821 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G80600.1 11 Arabidopsis thaliana 6E-57 410 31 50 368 (245) C
AT3G08860.2 11 Arabidopsis thaliana 1E-42 432 28 47 0 (0) M
AT3G08860.1 11 Arabidopsis thaliana 1E-42 432 28 47 2 (2) M
Os03g44150.1 7 Oryza sativa 0 436 72 87 0 (0) M
Os05g03830.1 7 Oryza sativa 2E-59 407 31 49 14 (14) C
Os04g52440.1 7 Oryza sativa 1E-41 421 30 48 0 (0) C
Zm00001eb050460_P003 agpv5 Zea mays 0 437 72 87 0 (0) M
Zm00001eb050460_P002 agpv5 Zea mays 0 437 72 87 0 (0) M
GRMZM2G080828_P01 3.21 Zea mays 0 437 72 87 5 (5) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aminotran_1_2(1) Aminotran_3(1)
TargetP:	Mitochondria (Class 2 C0.226; M0.920; S0.004; _0.017)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	475 aa (-cTP 445)
Molecular Weight	52.18 kDA(-cTP )
PI	7.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
119	Detail								root [B. rapa]	plastid stroma
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
1650	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	m48
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2028	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2286	Detail								[A. thaliana]		Clp C1 WT
2296	Detail								[A. thaliana]		Clp C1 WT
2300	Detail								[A. thaliana]		Clp C1 TRAP
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

17828791(total leaf)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20018591(Zn2+ binding (mitochondria - cell culture))
21173025(root proteome)

Comparative Proteomics Data