PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G64320.1 11 Arabidopsis thaliana 4E-67 483 30 49 0 (0) M
AT3G48810.1 11 Arabidopsis thaliana 8E-66 434 30 52 0 (0) S
AT4G20090.2 11 Arabidopsis thaliana 2E-65 406 34 53 0 (0) C
Os01g48140.1 7 Oryza sativa 7E-110 460 39 57 0 (0) M
Os05g04160.1 7 Oryza sativa 4E-68 406 30 51 0 (0) M
Os02g35750.1 7 Oryza sativa 2E-60 418 29 50 0 (0) C
Zm00001eb359970_P001 agpv5 Zea mays 1E-114 466 40 59 0 (0) _
Zm00001eb359970_P002 agpv5 Zea mays 1E-114 466 40 59 0 (0) _
Zm00001eb359970_P003 agpv5 Zea mays 1E-114 466 40 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(2) ATP13(5) Cys_knot(3) DUF4074(2) DUF4809(2) Exog_C(2) MRP-S27(2) PEP_hydr
TargetP:	Cytoplasm (Class 3 C0.041; M0.219; S0.126; _0.812)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	472 aa (-cTP 448)
Molecular Weight	52.88 kDA(-cTP )
PI	8.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data