PPDB

The Plant Proteome Database

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AT5G46100.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64320.1 11Arabidopsis thaliana4E-6748330490 (0)M
AT3G48810.1 11Arabidopsis thaliana8E-6643430520 (0)S
AT4G20090.2 11Arabidopsis thaliana2E-6540634530 (0)C
Os01g48140.1 7Oryza sativa7E-11046039570 (0)M
Os05g04160.1 7Oryza sativa4E-6840630510 (0)M
Os02g35750.1 7Oryza sativa2E-6041829500 (0)C
Zm00001eb359970_P001 agpv5Zea mays1E-11446640590 (0)_
Zm00001eb359970_P002 agpv5Zea mays1E-11446640590 (0)_
Zm00001eb359970_P003 agpv5Zea mays1E-11446640590 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(2) ATP13(5) Cys_knot(3) DUF4074(2) DUF4809(2) Exog_C(2) MRP-S27(2) PEP_hydr
TargetP: Cytoplasm (Class 3 C0.041; M0.219; S0.126; _0.812)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 472 aa (-cTP 448)
Molecular Weight 52.88 kDA(-cTP )
PI 8.04(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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