PPDB

 The Plant Proteome Database

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AT5G46060.1   spastin%2C putative (Protein of unknown function%2C DUF599)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24600.2 11Arabidopsis thaliana2E-4724537580 (0)M
AT5G24600.1 11Arabidopsis thaliana8E-4722439580 (0)M
AT3G18215.1 11Arabidopsis thaliana1E-4223538580 (0)_
Os08g28970.1 7Oryza sativa7E-7822852700 (0)S
Os09g15780.1 7Oryza sativa4E-6922749660 (0)S
Os08g05780.1 7Oryza sativa2E-4122437560 (0)S
v1_GRMZM2G321010_P01 4a53Zea mays9E-8023651700 (0)S
Zm00001eb042620_P001 agpv5Zea mays9E-8023651700 (0)S
GRMZM2G321010_P01 3.21Zea mays9E-8023651700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF373(2) DUF599(1)
TargetP: Secreted (Class 2 C0.001; M0.083; S0.934; _0.190)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 4 TMs
TAT position:
Length 248 aa (-cTP 172)
Molecular Weight 28.17 kDA(-cTP )
PI 8.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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