PPDB

 The Plant Proteome Database

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AT5G45950.1   GDSL-like Lipase/Acylhydrolase superfamily protein
Lab Annot. GDSL-like Lipase/Acylhydrolase protein
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45960.1 11Arabidopsis thaliana2E-8731643620 (0)S
AT2G04570.1 11Arabidopsis thaliana8E-8332540580 (0)S
AT2G42990.1 11Arabidopsis thaliana3E-8133138590 (0)S
Os02g01980.1 7Oryza sativa1E-8931943610 (0)S
Os09g04710.1 7Oryza sativa1E-7833139570 (0)M
Os09g04624.1 7Oryza sativa5E-7832238570 (0)S
GRMZM2G122261_P02 3.21Zea mays7E-9731844620 (0)M
v1_GRMZM2G122261_P02 4a53Zea mays7E-9731844620 (0)M
Zm00001eb268440_P002 agpv5Zea mays7E-9731844620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Lipase_GDSL(1)
TargetP: Secreted (Class 2 C0.013; M0.175; S0.934; _0.018)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 357 aa (-cTP 327)
Molecular Weight 39.85 kDA(-cTP )
PI 8.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
17216043(leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help