PPDB

The Plant Proteome Database

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AT5G45920.1   SGNH hydrolase-type esterase superfamily protein

Lab Annot.
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45920.4 11Arabidopsis thaliana02411001000 (0)_
AT5G45920.3 11Arabidopsis thaliana1E-14118999990 (0)_
AT5G45920.2 11Arabidopsis thaliana1E-14118999990 (0)_
Os01g11570.1 7Oryza sativa2E-9223958726 (6)_
Os10g33690.1 7Oryza sativa8E-8024251650 (0)C
Os06g06230.1 7Oryza sativa5E-6716857700 (0)C
v1_GRMZM2G102572_P01 4a53Zea mays1E-90240577112 (12)_
Zm00001eb119990_P001 agpv5Zea mays1E-9024057710 (0)_
GRMZM2G102572_P01 3.21Zea mays1E-90240577113 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1) Lipase_GDSL_2(1)
TargetP: Cytoplasm (Class 2 C0.079; M0.186; S0.049; _0.828)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 241 aa (-cTP 181)
Molecular Weight 27.15 kDA(-cTP )
PI 4.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help