PPDB

The Plant Proteome Database

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AT5G45790.1   Ubiquitin carboxyl-terminal hydrolase family protein

Lab Annot. similar to RPD1 (ROOT PRIMORDIUM DEFECTIVE 1) DUF860 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45790.2 11Arabidopsis thaliana035594970 (0)_
AT4G33495.1 11Arabidopsis thaliana1E-7029342633 (3)M
AT1G06440.1 11Arabidopsis thaliana2E-6929941610 (0)M
Os02g26550.1 7Oryza sativa9E-12829359780 (0)M
Os02g26550.2 7Oryza sativa9E-12829359780 (0)M
Os02g26550.3 7Oryza sativa9E-12829359780 (0)M
GRMZM2G180166_P01 3.21Zea mays1E-12429659780 (0)M
v1_GRMZM2G180166_P01 4a53Zea mays1E-12429659780 (0)M
Zm00001eb405250_P001 agpv5Zea mays1E-12429659780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PORR(1) SPACA9(1)
TargetP: Mitochondria (Class 5 C0.046; M0.453; S0.105; _0.366)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 354 aa (-cTP 317)
Molecular Weight 41.64 kDA(-cTP )
PI 9.01(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help