PPDB

The Plant Proteome Database

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AT5G45690.1   histone acetyltransferase (DUF1264)

Lab Annot. Protein of unknown function (DUF1264)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18920.1 11Arabidopsis thaliana6E-13724773840 (0)_
AT1G29680.1 11Arabidopsis thaliana1E-9623256723 (2)_
AT1G05510.1 11Arabidopsis thaliana2E-55231366119 (17)_
Os01g54520.2 7Oryza sativa2E-9725253710 (0)C
Os01g54520.1 7Oryza sativa2E-9725253710 (0)C
Os01g52830.1 7Oryza sativa3E-9525054690 (0)C
GRMZM2G043521_P01 3.21Zea mays7E-10225255710 (0)_
Zm00001eb153230_P001 agpv5Zea mays7E-10225255710 (0)_
v1_GRMZM2G043521_P01 4a53Zea mays7E-10225255710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1264(2)
TargetP: Cytoplasm (Class 2 C0.189; M0.049; S0.087; _0.935)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 247 aa (-cTP 208)
Molecular Weight 27.85 kDA(-cTP )
PI 5.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
17828791(total leaf)
17293592(total seedlings û light and dark grown)
18599647(seed proteome)
18436743(specific to roots)
18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help