PPDB

The Plant Proteome Database

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AT5G45520.1   Leucine-rich repeat (LRR) family protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45520.2 11Arabidopsis thaliana011671001000 (0)_
AT5G45500.8 11Arabidopsis thaliana2E-11749943630 (0)_
AT5G45500.7 11Arabidopsis thaliana2E-11749943630 (0)_
Os01g58520.1 7Oryza sativa3E-5232536520 (0)_
Os11g42060.1 7Oryza sativa3E-4934235520 (0)_
Os04g41380.1 7Oryza sativa7E-4835735530 (0)_
v1_GRMZM2G103135_P01 4a53Zea mays2E-5331936540 (0)_
GRMZM2G103135_P01 3.21Zea mays2E-5331936540 (0)_
Zm00001eb181850_P001 agpv5Zea mays1E-2218536520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_4(6) LRR_8(5)
TargetP: Cytoplasm (Class 3 C0.176; M0.051; S0.138; _0.759)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1167 aa (-cTP 1152)
Molecular Weight 132.58 kDA(-cTP )
PI 5.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1676Detail       Rosettes [A. thaliana]  
1709Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
18436743(specific to roots)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help