PPDB

PPDB	The Plant Proteome Database

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AT5G45510.1 Leucine-rich repeat (LRR) family protein

Lab Annot.

Leucine-rich repeat (LRR) protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G45510.2 11 Arabidopsis thaliana 0 1206 100 100 25 (13) _
AT4G19050.1 11 Arabidopsis thaliana 3E-179 798 44 61 0 (0) _
AT3G25510.1 11 Arabidopsis thaliana 3E-16 344 29 47 0 (0) _
Os01g58530.1 7 Oryza sativa 1E-16 531 26 42 0 (0) _
Os07g17230.1 7 Oryza sativa 6E-09 141 39 53 0 (0) _
Os06g43670.1 7 Oryza sativa 1E-08 322 28 47 0 (0) _
v1_GRMZM2G469414_P01 4a53 Zea mays 5E-13 314 28 47 0 (0) S
GRMZM2G469414_P01 3.21 Zea mays 5E-13 314 28 47 0 (0) S
Zm00001eb227070_P003 agpv5 Zea mays 8E-13 314 28 47 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(1) AAA_22(1) AAA_7(1) LRR_4(11) LRR_5(3) LRR_8(7) RNA_helicase(1)
TargetP:	Cytoplasm (Class 2 C0.096; M0.091; S0.151; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1222 aa (-cTP 1204)
Molecular Weight	137.92 kDA(-cTP )
PI	5.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2268	Detail								seedlings [A. thaliana]	total tissue	wild-type
2272	Detail								seedlings [A. thaliana]	total tissue	wild-type
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))
19888209(leaves)
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data