PPDB

The Plant Proteome Database

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AT5G45500.1   RNI-like superfamily protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45500.6 11Arabidopsis thaliana07711001000 (0)_
AT5G45500.4 11Arabidopsis thaliana07711001000 (0)_
AT5G45500.2 11Arabidopsis thaliana07711001001 (0)_
Os01g58520.1 7Oryza sativa4E-8850334530 (0)_
Os01g72410.1 7Oryza sativa1E-6552129480 (0)M
Os04g41380.1 7Oryza sativa2E-5952132480 (0)_
v1_GRMZM2G103135_P01 4a53Zea mays1E-7549432520 (0)_
GRMZM2G103135_P01 3.21Zea mays1E-7549432520 (0)_
v1_GRMZM2G056442_P01 4a53Zea mays1E-3033730480 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_8(3)
TargetP: Cytoplasm (Class 4 C0.091; M0.357; S0.047; _0.631)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 771 aa (-cTP 731)
Molecular Weight 87.69 kDA(-cTP )
PI 8.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17272265(ubiquinated proteins (suspension cells))
17660356(tonoplast (Brassica oleracea buds))
18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help