PPDB

 The Plant Proteome Database

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AT5G45480.1   transmembrane protein%2C putative (DUF594)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45540.1 11Arabidopsis thaliana089154660 (0)_
AT5G45470.1 11Arabidopsis thaliana090347620 (0)_
AT5G45460.1 11Arabidopsis thaliana070944590 (0)_
Os11g42030.1 7Oryza sativa6E-7335939580 (0)S
Os11g42080.1 7Oryza sativa7E-7336739580 (0)M
Os10g20770.1 7Oryza sativa7E-7035740570 (0)S
Zm00001eb118320_P001 agpv5Zea mays1E-6638640550 (0)_
AC204515.4_FGP006 3.21Zea mays3E-5331037570 (0)_
v1_AC204515.4_FGP006 4a53Zea mays3E-5331037570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 7TM_GPCR_Srz(1) DUF4220(1) DUF594(1)
TargetP: Cytoplasm (Class 4 C0.256; M0.030; S0.119; _0.496)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 7 TMs
TAT position:
Length 877 aa (-cTP 807)
Molecular Weight 100.80 kDA(-cTP )
PI 8.99(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(PlasmaMembrane-LOPIT-callus)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help