PPDB

The Plant Proteome Database

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AT5G45470.1   transmembrane protein%2C putative (DUF594)

Lab Annot. unknown function (DUF594)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45460.1 11Arabidopsis thaliana069378850 (0)_
AT5G45530.1 11Arabidopsis thaliana086653699 (9)S
AT5G45480.1 11Arabidopsis thaliana090347620 (0)_
Os11g42030.1 7Oryza sativa5E-6736638580 (0)S
Os11g42080.1 7Oryza sativa8E-6736437570 (0)M
Os01g72380.1 7Oryza sativa8E-6742839550 (0)_
Zm00001eb118320_P001 agpv5Zea mays3E-6638539520 (0)_
AC204515.4_FGP006 3.21Zea mays8E-5727642610 (0)_
v1_AC204515.4_FGP006 4a53Zea mays8E-5727642610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF262(1) DUF4220(1) DUF594(1)
TargetP: Cytoplasm (Class 4 C0.127; M0.054; S0.080; _0.471)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 866 aa (-cTP 796)
Molecular Weight 100.19 kDA(-cTP )
PI 8.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help