PPDB

 The Plant Proteome Database

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AT5G45460.1   transmembrane protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45470.1 11Arabidopsis thaliana069378850 (0)_
AT5G45530.1 11Arabidopsis thaliana066851679 (9)S
AT5G45480.1 11Arabidopsis thaliana070944590 (0)_
Os11g42030.1 7Oryza sativa1E-6936638590 (0)S
Os11g42080.1 7Oryza sativa3E-6836637580 (0)M
Os01g58500.1 7Oryza sativa1E-6636841580 (0)S
Zm00001eb118320_P001 agpv5Zea mays5E-6751033450 (0)_
GRMZM2G032551_P01 3.21Zea mays8E-4437832500 (0)S
v1_GRMZM2G032551_P01 4a53Zea mays8E-4437832500 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4220(1) LMSTEN(2)
TargetP: Cytoplasm (Class 4 C0.183; M0.094; S0.055; _0.514)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 9 TMs
TAT position:
Length 703 aa (-cTP 669)
Molecular Weight 81.72 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help