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PPDB	The Plant Proteome Database

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AT5G45420.1 Duplicated homeodomain-like superfamily protein

Lab Annot.

Duplicated homeodomain-like protein
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G45420.3 11 Arabidopsis thaliana 0 309 100 100 0 (0) _
AT5G45420.2 11 Arabidopsis thaliana 0 309 100 100 0 (0) _
AT3G11450.1 11 Arabidopsis thaliana 6E-19 239 28 46 36 (0) _
Os08g06240.1 7 Oryza sativa 6E-48 252 43 57 0 (0) _
Os04g30890.1 7 Oryza sativa 2E-21 191 34 48 0 (0) _
GRMZM2G001530_P01 3.21 Zea mays 2E-58 251 43 60 0 (0) _
Zm00001eb415690_P002 agpv5 Zea mays 2E-58 251 43 60 0 (0) _
Zm00001eb415690_P001 agpv5 Zea mays 2E-58 251 43 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Myb_DNA-bind_6(2) Myb_DNA-binding(2) PAP2(1) PerC(2)
TargetP:	Cytoplasm (Class 1 C0.039; M0.126; S0.028; _0.932)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	309 aa (-cTP 222)
Molecular Weight	34.36 kDA(-cTP )
PI	8.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data