PPDB

The Plant Proteome Database

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AT5G45330.1   decapping 5-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45330.3 11Arabidopsis thaliana05051001000 (0)_
AT5G45330.2 11Arabidopsis thaliana05051001000 (0)_
AT1G26110.2 11Arabidopsis thaliana7E-3285688462 (46)_
Os06g30060.2 7Oryza sativa1E-2910360763 (3)_
Os06g30060.1 7Oryza sativa1E-2910360763 (3)_
Os01g02090.2 7Oryza sativa7E-297573860 (0)C
Zm00001eb281450_P004 agpv5Zea mays7E-3211854700 (0)S
Zm00001eb281450_P006 agpv5Zea mays1E-3111156720 (0)S
Zm00001eb281450_P005 agpv5Zea mays2E-318270860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FDF(1) LSM14(1) SM-ATX(1)
TargetP: Chloroplast (Class 3 C0.778; M0.045; S0.154; _0.303)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 571 aa (-cTP 554)
Molecular Weight 61.80 kDA(-cTP 60.14)
PI 6.12(-cTP 6.23)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help