PPDB

PPDB	The Plant Proteome Database

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AT5G45290.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G45290.2 11 Arabidopsis thaliana 0 546 99 99 0 (0) C
AT3G16720.1 11 Arabidopsis thaliana 8E-12 90 36 56 0 (0) _
AT3G19950.2 11 Arabidopsis thaliana 2E-11 83 34 57 0 (0) _
Os05g32350.1 7 Oryza sativa 1E-97 298 57 70 0 (0) C
Os02g55520.2 7 Oryza sativa 9E-45 184 52 60 0 (0) M
Os02g55520.1 7 Oryza sativa 5E-44 176 52 61 0 (0) M
Zm00001eb350790_P002 agpv5 Zea mays 1E-89 294 57 69 0 (0) C
GRMZM2G060999_P01 3.21 Zea mays 1E-89 294 57 69 0 (0) C
Zm00001eb350790_P001 agpv5 Zea mays 3E-89 294 57 69 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) GAGA(1) Prok-RING_4(1) Smoothelin(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3H
TargetP:	Chloroplast (Class 2 C0.865; M0.194; S0.005; _0.073)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	545 aa (-cTP 517)
Molecular Weight	60.77 kDA(-cTP 58.03)
PI	6.37(-cTP 6.28)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data