PPDB

PPDB	The Plant Proteome Database

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AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3)

Lab Annot.

root hair defective 3 GTP-binding (RHD3) protein
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G13870.1 11 Arabidopsis thaliana 0 765 67 81 78 (78) _
AT1G72960.1 11 Arabidopsis thaliana 0 759 65 81 0 (0) _
AT3G13870.2 11 Arabidopsis thaliana 0 696 66 80 76 (76) _
Os01g39310.1 7 Oryza sativa 0 809 64 78 42 (42) _
Os12g41170.1 7 Oryza sativa 0 762 64 78 0 (0) _
Os01g39310.3 7 Oryza sativa 0 701 68 80 37 (37) _
GRMZM2G418160_P01 3.21 Zea mays 0 760 59 76 1 (1) _
AC196426.3_FGP007 3.21 Zea mays 0 821 54 68 23 (23) _
v1_AC196426.3_FGP007 4a53 Zea mays 0 821 54 68 10 (10) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) AAA_16(2) AAA_28(1) AAA_29(1) ABC_tran(1) Cytochrom_C_2(1) Dynamin_N(1
TargetP:	Cytoplasm (Class 2 C0.176; M0.045; S0.036; _0.956)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	3 TMs
TAT position:
Length	834 aa (-cTP 765)
Molecular Weight	93.57 kDA(-cTP )
PI	5.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data