PPDB

 The Plant Proteome Database

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AT5G44830.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44840.1 11Arabidopsis thaliana034187930 (0)S
AT4G35670.1 11Arabidopsis thaliana1E-13334156710 (0)S
AT5G27530.1 11Arabidopsis thaliana1E-12633054730 (0)_
Os07g10680.1 7Oryza sativa2E-7631240580 (0)S
Os07g10740.1 7Oryza sativa9E-7633039570 (0)S
Os01g07790.1 7Oryza sativa1E-7130440610 (0)_
GRMZM2G092746_P01 3.21Zea mays9E-8131342590 (0)S
v1_GRMZM2G092746_P01 4a53Zea mays9E-8131342590 (0)S
Zm00001eb061770_P001 agpv5Zea mays9E-8131342590 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_28(1)
TargetP: Cytoplasm (Class 3 C0.103; M0.104; S0.053; _0.667)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 332 aa (-cTP 288)
Molecular Weight 36.36 kDA(-cTP )
PI 6.45(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help