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PPDB	The Plant Proteome Database

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AT5G44800.1 chromatin remodeling 4

Lab Annot.

chromatin remodeling 4
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G25170.4 11 Arabidopsis thaliana 5E-172 818 40 58 0 (0) _
AT2G25170.1 11 Arabidopsis thaliana 5E-172 818 40 58 4 (2) _
AT2G25170.2 11 Arabidopsis thaliana 7E-172 818 40 58 0 (0) M
Os07g31450.1 7 Oryza sativa 0 1787 49 62 0 (0) M
Os06g08480.1 7 Oryza sativa 2E-173 819 40 58 22 (22) _
Os01g65850.1 7 Oryza sativa 3E-113 661 36 53 0 (0) M
GRMZM2G316191_P01 3.21 Zea mays 0 1809 48 60 0 (0) M
v1_GRMZM2G316191_P01 4a53 Zea mays 0 1809 48 60 1 (1) M
GRMZM2G316191_P02 3.21 Zea mays 0 1814 48 60 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_22(1) ADK_lid(1) Chromo(2) DUF1087(2) HDA2-3(1) Helicase_C(1) PHD(1) ResIII(
TargetP:	Cytoplasm (Class 2 C0.096; M0.215; S0.035; _0.825)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	2223 aa (-cTP 2143)
Molecular Weight	247.92 kDA(-cTP )
PI	5.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1455	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data