PPDB

The Plant Proteome Database

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AT5G44730.1   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Lab Annot. haloacid dehalogenase-like hydrolase protein
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44730.2 11Arabidopsis thaliana025510010029 (17)S
Os06g45440.2 7Oryza sativa2E-142250748825 (25)S
Os06g45440.1 7Oryza sativa2E-142250748825 (25)S
Os02g07730.1 7Oryza sativa4E-12924768820 (0)S
v1_GRMZM2G151734_P01 4a53Zea mays1E-147251768812 (12)S
Zm00001eb389800_P004 agpv5Zea mays1E-14725176880 (0)S
Zm00001eb389800_P001 agpv5Zea mays1E-14725176880 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HAD(1) HAD_2(1) Hydrolase(1) Hydrolase_like(1)
TargetP: Secreted (Class 4 C0.014; M0.128; S0.716; _0.398)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 255 aa (-cTP 245)
Molecular Weight 28.81 kDA(-cTP )
PI 6.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help