PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G44560.1 SNF7 family protein

Lab Annot.

Mapman: 27.3.71 RNA.regulation of transcription.SNF7

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G44560.2 11 Arabidopsis thaliana 8E-144 202 100 100 0 (0) _
AT5G44560.4 11 Arabidopsis thaliana 8E-126 178 99 100 0 (0) _
AT1G03950.1 11 Arabidopsis thaliana 1E-105 220 68 82 0 (0) _
Os03g43860.1 7 Oryza sativa 6E-118 233 78 86 0 (0) _
Os10g33660.1 7 Oryza sativa 1E-106 220 69 84 0 (0) _
Os11g47710.1 7 Oryza sativa 8E-42 191 45 65 0 (0) _
Zm00001eb218770_P002 agpv5 Zea mays 4E-115 228 77 85 0 (0) _
v1_GRMZM2G046676_P01 4a53 Zea mays 4E-115 228 77 85 0 (0) _
GRMZM2G046676_P01 3.21 Zea mays 4E-115 228 77 85 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cep57_MT_bd(2) DUF4407(2) Flagellin_C(2) GAS(1) MerR-DNA-bind(3) Snf7(1) YlqD(2)
TargetP:	Cytoplasm (Class 3 C0.119; M0.248; S0.038; _0.651)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	222 aa (-cTP 203)
Molecular Weight	24.30 kDA(-cTP )
PI	9.54(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22010978(Endosomal-sorting-interactome-VPS2.2)

Comparative Proteomics Data