PPDB

PPDB	The Plant Proteome Database

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AT5G44310.1 Late embryogenesis abundant protein (LEA) family protein

Lab Annot.

Late embryogenesis abundant protein (LEA) protein
Mapman: 35.1.22 not assigned.no ontology.late embryogenesis abundant domain-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G44310.2 11 Arabidopsis thaliana 0 290 98 98 4 (1) C
AT4G21020.1 11 Arabidopsis thaliana 2E-50 220 53 65 5 (4) M
AT1G72100.1 11 Arabidopsis thaliana 1E-09 164 35 50 4 (2) S
Os01g50910.2 7 Oryza sativa 4E-08 135 34 51 0 (0) _
Os01g50910.1 7 Oryza sativa 6E-08 135 34 51 0 (0) _
Os05g46480.1 7 Oryza sativa 7E-08 132 38 53 0 (0) _
v1_GRMZM2G371375_P02 4a53 Zea mays 7E-15 181 37 55 0 (0) M
Zm00001eb071160_P001 agpv5 Zea mays 1E-12 230 33 44 0 (0) M
GRMZM2G371375_P01 3.21 Zea mays 1E-12 230 33 44 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Apolipoprotein(2) ApoLp-III(2) DUF3721(4) DUF883(9) LEA_4(7) THDPS_N_2(3) YtxH(4
TargetP:	Cytoplasm (Class 2 C0.119; M0.126; S0.132; _0.885)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	295 aa (-cTP 270)
Molecular Weight	33.36 kDA(-cTP )
PI	5.42(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
18436743(specific to seeds)

Comparative Proteomics Data