PPDB

The Plant Proteome Database

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AT5G44230.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44230.2 11Arabidopsis thaliana05601001000 (0)M
AT2G29760.1 11Arabidopsis thaliana2E-15260838591 (0)C
AT5G06540.1 11Arabidopsis thaliana5E-15261136610 (0)S
Os06g47920.1 7Oryza sativa056151680 (0)C
Os01g08120.1 7Oryza sativa3E-16159240620 (0)M
Os07g44299.1 7Oryza sativa1E-14155140590 (0)_
v1_GRMZM2G177894_P01 4a53Zea mays056751690 (0)M
Zm00001eb226290_P001 agpv5Zea mays056751690 (0)M
GRMZM2G177894_P01 3.21Zea mays056751690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CARD(1) DYW_deaminase(1) PPR(10) PPR_1(8) PPR_2(8) PPR_3(10) PPR_long(4) TPR_1(3
TargetP: Chloroplast (Class 4 C0.357; M0.095; S0.149; _0.116)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 657 aa (-cTP 608)
Molecular Weight 73.67 kDA(-cTP 68.30)
PI 7.82(-cTP 7.23)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help