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The Plant Proteome Database

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AT5G44120.1   RmlC-like cupins superfamily protein

Lab Annot. RmlC-like cupins protein
Mapman: 33.1 development.storage proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44120.3 11Arabidopsis thaliana028499100120 (80)S
AT5G44120.2 11Arabidopsis thaliana02849910040 (19)_
AT1G03880.1 11Arabidopsis thaliana2E-143285738470 (45)S
Os10g26060.1 7Oryza sativa1E-6727341650 (0)S
Os01g55690.1 7Oryza sativa2E-6727339674 (4)S
Os02g15150.2 7Oryza sativa1E-6626941650 (0)M
Zm00001eb267120_P001 agpv5Zea mays5E-4427132530 (0)_
GRMZM2G174883_P01 3.21Zea mays2E-4327132530 (0)S
Zm00001eb267120_P002 agpv5Zea mays2E-4327132530 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_1(2) RAP80_UIM(2)
TargetP: Mitochondria (Class 4 C0.036; M0.679; S0.015; _0.444)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 285 aa (-cTP 222)
Molecular Weight 31.65 kDA(-cTP )
PI 8.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1351Detail       leaf [A. thaliana] total tissue t1-t2
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2243Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
17293592(total seedlings û light and dark grown)
18599647(seed proteome)
18814325(cotyledons)
20118269(developing seeds)
19562800(oil body mature seeds (Brassica napus))
19334764(plasma membrane (cell culture))
20702726(mature seeds)
19292762(Ubiquitin-affinity seedling (10 d))
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help