PPDB

 The Plant Proteome Database

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AT5G44110.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein
Lab Annot. POP1
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03905.1 11Arabidopsis thaliana5E-17529082881 (1)_
AT5G44110.2 11Arabidopsis thaliana3E-14520795960 (0)_
AT1G03905.4 11Arabidopsis thaliana5E-13222681860 (0)_
Os02g56550.1 7Oryza sativa6E-154280738521 (21)_
Os03g20170.1 7Oryza sativa6E-9624957740 (0)_
Os02g09720.1 7Oryza sativa1E-0724827411 (1)_
Zm00001eb191710_P003 agpv5Zea mays1E-15128172830 (0)_
v1_GRMZM2G075336_P02 4a53Zea mays1E-15128172837 (7)_
GRMZM2G075336_P02 3.21Zea mays1E-15128172836 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_14(1) AAA_15(1) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA
TargetP: Cytoplasm (Class 2 C0.144; M0.059; S0.135; _0.754)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 282 aa (-cTP 237)
Molecular Weight 31.36 kDA(-cTP )
PI 6.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help