PPDB

PPDB	The Plant Proteome Database

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AT5G44090.1 Calcium-binding EF-hand family protein

Lab Annot.

calcium-binding EF hand protein, protein phosphatase 2A 62 kDa B'' regulatory subunit
Mapman: 29.4 protein.postranslational modification

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G44090.2 11 Arabidopsis thaliana 0 488 100 100 0 (0) S
AT1G03960.1 11 Arabidopsis thaliana 0 540 82 89 0 (0) _
AT1G03960.5 11 Arabidopsis thaliana 0 494 82 88 0 (0) _
Os10g33680.1 7 Oryza sativa 0 543 70 82 21 (21) _
Os02g09840.1 7 Oryza sativa 0 539 60 75 0 (0) _
Os05g05710.1 7 Oryza sativa 7E-20 249 27 48 0 (0) _
Zm00001eb045890_P004 agpv5 Zea mays 0 542 70 82 0 (0) _
Zm00001eb045890_P003 agpv5 Zea mays 0 542 70 82 0 (0) _
GRMZM2G148323_P01 3.21 Zea mays 0 542 70 82 55 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	EF-hand_1(5) EF-hand_13(2) EF-hand_5(2) EF-hand_6(5) EF-hand_7(4) EF-hand_8(3)
TargetP:	Cytoplasm (Class 1 C0.076; M0.070; S0.002; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	538 aa (-cTP 442)
Molecular Weight	62.32 kDA(-cTP )
PI	4.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1613	Detail								Natural Senescence leaf [A. thaliana]
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data