PPDB

PPDB	The Plant Proteome Database

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AT5G43950.1 vacuolar protein sorting-associated protein (DUF946)

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G04090.1 11 Arabidopsis thaliana 0 576 69 81 0 (0) _
AT3G04350.1 11 Arabidopsis thaliana 0 575 55 69 0 (0) _
AT5G18490.1 11 Arabidopsis thaliana 0 571 54 69 0 (0) _
Os03g04930.1 7 Oryza sativa 0 552 56 70 0 (0) _
Os03g04930.2 7 Oryza sativa 0 552 56 70 0 (0) _
Os03g51150.1 7 Oryza sativa 0 570 52 66 21 (21) _
Zm00001eb003480_P001 agpv5 Zea mays 0 553 55 69 0 (0) M
GRMZM5G823004_P01 3.21 Zea mays 0 553 55 69 0 (0) M
v1_GRMZM2G075622_P01 4a53 Zea mays 0 553 55 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Vps62(1)
TargetP:	Cytoplasm (Class 3 C0.106; M0.234; S0.059; _0.693)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	566 aa (-cTP 539)
Molecular Weight	64.29 kDA(-cTP )
PI	6.24(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data