PPDB

 The Plant Proteome Database

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AT5G43930.1   Transducin family protein / WD-40 repeat family protein
Lab Annot. Transducin protein / WD-40 repeat protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43930.2 11Arabidopsis thaliana07261001000 (0)C
AT5G43930.3 11Arabidopsis thaliana07261001000 (0)C
AT5G43930.4 11Arabidopsis thaliana075296960 (0)C
Os02g18820.1 7Oryza sativa4E-11635557640 (0)C
Os02g18820.2 7Oryza sativa4E-11635557640 (0)C
Os09g12550.1 7Oryza sativa6E-10834654660 (0)_
v1_GRMZM2G353548_P04 4a53Zea mays072748590 (0)_
GRMZM2G353548_P04 3.21Zea mays072748590 (0)_
v1_GRMZM2G353548_P02 4a53Zea mays074448600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(4) Peptidase_S8(1) WD40(6)
TargetP: Chloroplast (Class 1 C0.967; M0.076; S0.010; _0.121)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 726 aa (-cTP 682) (-lTP 637)
Molecular Weight 78.94 kDA(-cTP 73.90)(-lTP 68.73)
PI 8.85(-cTP 7.79)(-lTP 7.083)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help