PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G43870.1 auxin canalization protein (DUF828)

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G43870.2 11 Arabidopsis thaliana 0 385 99 100 0 (0) _
AT3G22810.1 11 Arabidopsis thaliana 0 469 62 74 0 (0) _
AT4G14740.1 11 Arabidopsis thaliana 0 472 62 75 0 (0) _
Os03g43510.1 7 Oryza sativa 1E-124 416 60 73 0 (0) _
Os12g41140.1 7 Oryza sativa 1E-99 477 51 65 0 (0) _
Os12g41140.3 7 Oryza sativa 4E-98 477 51 65 0 (0) _
Zm00001eb218820_P003 agpv5 Zea mays 1E-123 503 51 64 0 (0) _
v1_GRMZM2G078178_P01 4a53 Zea mays 1E-119 474 54 68 0 (0) _
Zm00001eb218820_P001 agpv5 Zea mays 1E-119 474 54 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_9_N(1) Auxin_canalis(1) BAF1_ABF1(1) PH_12(1) PH_2(1)
TargetP:	Cytoplasm (Class 4 C0.356; M0.136; S0.011; _0.607)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	453 aa (-cTP 393)
Molecular Weight	48.64 kDA(-cTP )
PI	9.44(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data