PPDB

PPDB	The Plant Proteome Database

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AT5G43850.1 RmlC-like cupins superfamily protein

Lab Annot.

ATARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion binding
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G14710.1 11 Arabidopsis thaliana 2E-91 172 68 84 22 (14) _
AT4G14710.2 11 Arabidopsis thaliana 2E-91 172 68 84 22 (14) _
AT4G14710.5 11 Arabidopsis thaliana 2E-91 172 68 84 19 (11) _
Os03g06620.1 7 Oryza sativa 4E-91 180 66 81 15 (15) _
Os10g28350.1 7 Oryza sativa 7E-89 182 64 79 0 (0) _
Os10g28360.1 7 Oryza sativa 2E-83 187 59 78 0 (0) _
v1_GRMZM2G165998_P01 4a53 Zea mays 8E-92 180 66 81 27 (27) _
GRMZM2G165998_P01 3.21 Zea mays 8E-92 180 66 81 26 (26) _
Zm00001eb004660_P003 agpv5 Zea mays 8E-92 180 66 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AraC_binding(1) ARD(1) Cupin_1(1) Cupin_2(1) Cupin_6(1) JmjC(1)
TargetP:	Cytoplasm (Class 2 C0.136; M0.162; S0.086; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	187 aa (-cTP 159)
Molecular Weight	22.45 kDA(-cTP )
PI	5.38(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1874	Detail								Total leaf [A. thaliana]	total soluble	wild-type
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data