PPDB

The Plant Proteome Database

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AT5G43790.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21065.1 11Arabidopsis thaliana9E-10145739580 (0)S
AT4G37380.1 11Arabidopsis thaliana2E-10048338570 (0)C
AT5G59200.1 11Arabidopsis thaliana7E-9748633540 (0)C
Os11g03690.1 7Oryza sativa2E-10438143610 (0)_
Os12g03450.1 7Oryza sativa2E-10338043610 (0)_
Os05g36350.1 7Oryza sativa2E-9048132550 (0)C
Zm00001eb076830_P001 agpv5Zea mays8E-9648333550 (0)M
GRMZM2G474929_P02 3.21Zea mays8E-9648333550 (0)M
Zm00001eb117600_P002 agpv5Zea mays2E-9047038550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(8) PPR_1(8) PPR_2(7) PPR_3(7) PPR_long(3) TPR_14(2)
TargetP: Cytoplasm (Class 5 C0.057; M0.153; S0.014; _0.349)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 460 aa (-cTP 405)
Molecular Weight 51.64 kDA(-cTP )
PI 8.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help