PPDB

The Plant Proteome Database

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AT5G43720.1   rRNA-processing EFG1-like protein (DUF2361)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04230.1 11Arabidopsis thaliana1E-14031673840 (0)M
AT1G04230.2 11Arabidopsis thaliana2E-13831673840 (0)M
Os03g58340.1 7Oryza sativa6E-7631953670 (0)C
Zm00001eb212900_P001 agpv5Zea mays6E-8026260750 (0)M
Zm00001eb212900_P002 agpv5Zea mays7E-8026260750 (0)M
Zm00001eb212900_P003 agpv5Zea mays9E-8026260750 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BUD22(1) Efg1(2)
TargetP: Chloroplast (Class 5 C0.562; M0.207; S0.009; _0.479)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 329 aa (-cTP 301)
Molecular Weight 37.47 kDA(-cTP 34.35)
PI 9.87(-cTP 9.66)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help