PPDB

PPDB	The Plant Proteome Database

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AT5G43630.1 zinc knuckle (CCHC-type) family protein

Lab Annot.

zinc knuckle (CCHC-type) protein
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G43630.4 11 Arabidopsis thaliana 0 831 100 100 0 (0) _
AT5G43630.2 11 Arabidopsis thaliana 0 831 100 100 0 (0) _
AT5G43630.3 11 Arabidopsis thaliana 0 831 100 100 0 (0) _
Os01g56780.3 7 Oryza sativa 1E-32 140 47 69 0 (0) _
Os01g56780.2 7 Oryza sativa 1E-32 140 47 69 0 (0) _
Os01g56780.1 7 Oryza sativa 1E-32 140 47 69 0 (0) _
Zm00001eb151720_P004 agpv5 Zea mays 3E-30 138 44 66 0 (0) C
Zm00001eb151720_P003 agpv5 Zea mays 3E-30 138 44 66 0 (0) C
Zm00001eb151720_P002 agpv5 Zea mays 3E-30 138 44 66 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Plus-3(1) Red1(1) zf-CCHC(2) zf-CCHC_3(2) zf-CCHC_5(2)
TargetP:	Cytoplasm (Class 3 C0.178; M0.111; S0.023; _0.750)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	831 aa (-cTP 816)
Molecular Weight	90.61 kDA(-cTP )
PI	5.24(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18686298(tonoplast - phosphoproteome (leaves))
22060019(phosphoproteome - N-starved seedlings)
20813957(SUMO proteome)

Comparative Proteomics Data