PPDB

PPDB	The Plant Proteome Database

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AT5G43560.1 TRAF-like superfamily protein

Lab Annot.

TRAF-like protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G43560.2 11 Arabidopsis thaliana 0 1055 100 100 1 (1) _
AT1G04300.1 11 Arabidopsis thaliana 0 1105 61 74 1 (1) _
AT1G04300.3 11 Arabidopsis thaliana 0 1113 61 73 1 (1) _
Os12g40520.1 7 Oryza sativa 0 1179 44 57 0 (0) _
Os01g56800.3 7 Oryza sativa 0 522 60 75 0 (0) _
Os01g56800.1 7 Oryza sativa 0 522 60 75 0 (0) M
Zm00001eb030950_P001 agpv5 Zea mays 0 619 61 74 0 (0) _
Zm00001eb030930_P001 agpv5 Zea mays 0 458 59 74 0 (0) _
GRMZM2G039094_P01 3.21 Zea mays 0 458 59 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MATH(3)
TargetP:	Cytoplasm (Class 5 C0.588; M0.062; S0.130; _0.697)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1055 aa (-cTP 968)
Molecular Weight	117.45 kDA(-cTP )
PI	6.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1874	Detail								Total leaf [A. thaliana]	total soluble	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data