PPDB

PPDB	The Plant Proteome Database

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AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53820.1 11 Arabidopsis thaliana 3E-13 126 38 53 0 (0) M
AT3G09290.1 11 Arabidopsis thaliana 8E-12 63 47 68 0 (0) _
AT3G23140.1 11 Arabidopsis thaliana 2E-11 44 61 70 0 (0) _
Os05g14130.1 7 Oryza sativa 2E-14 56 55 58 0 (0) _
Os07g23450.1 7 Oryza sativa 3E-13 32 84 87 0 (0) _
Os02g57550.1 7 Oryza sativa 1E-11 33 69 84 0 (0) _
v1_GRMZM2G443109_P01 4a53 Zea mays 2E-15 85 48 56 0 (0) _
v1_GRMZM2G409452_P01 4a53 Zea mays 2E-15 85 48 56 0 (0) _
GRMZM2G443109_P01 3.21 Zea mays 2E-15 85 48 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	zf-C2H2(2) zf-C2H2_2(1) zf-C2H2_4(1) zf-C2H2_6(1) zf-C2H2_jaz(1) zf-H2C2_2(1) zf
TargetP:	Chloroplast (Class 2 C0.892; M0.201; S0.018; _0.112)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	137 aa (-cTP 91)
Molecular Weight	15.35 kDA(-cTP 10.18)
PI	9.13(-cTP 7.19)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data