PPDB

PPDB	The Plant Proteome Database

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AT5G43530.1 Helicase protein with RING/U-box domain-containing protein

Lab Annot.

SNF2 domain/helicase domain/RING finger domain-containing protein
Mapman: 28.2 DNA.repair

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G22750.1 11 Arabidopsis thaliana 0 930 54 70 0 (0) _
AT5G05130.1 11 Arabidopsis thaliana 2E-112 678 34 52 0 (0) M
AT1G50410.1 11 Arabidopsis thaliana 1E-103 749 31 47 0 (0) _
Os04g09800.1 7 Oryza sativa 0 914 62 78 0 (0) _
Os02g32570.1 7 Oryza sativa 0 861 55 72 0 (0) _
Os02g32570.2 7 Oryza sativa 0 609 58 75 0 (0) _
Zm00001eb176980_P001 agpv5 Zea mays 0 914 59 73 0 (0) _
v1_GRMZM2G030768_P01 4a53 Zea mays 0 914 59 73 0 (0) _
GRMZM2G030768_P01 3.21 Zea mays 0 914 59 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_34(1) DEAD(1) Helicase_C(1) HIRAN(1) Prok-RING_4(1) ResIII(1) SNF2_N(1) zf-A
TargetP:	Cytoplasm (Class 2 C0.177; M0.070; S0.069; _0.862)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1277 aa (-cTP 1230)
Molecular Weight	144.33 kDA(-cTP )
PI	5.13(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
19546170(mature pollen grains)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data